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01/25/07 - USPTO Class 210 |  30 views | #20070017870 | Prev - Next | About this Page  210 rss/xml feed  monitor keywords

Multicapillary device for sample preparation

USPTO Application #: 20070017870
Title: Multicapillary device for sample preparation
Abstract: A multicapillary sample preparation device, especially useful for handling biological samples, comprising a plurality of uniform capillary tubes coated with a stationary phase, and arranged in a monolithic element. The multicapillary device is suitable for attachment to a pipette, micropipette, syringe, or other analytical or sample preparation instrument. (end of abstract)



Agent: Mcquaide Blasko - State College, PA, US
Inventors: Yuri P. Belov, Carlo G. Pantano, Ksenia Lvova
USPTO Applicaton #: 20070017870 - Class: 210656000 (USPTO)

Related Patent Categories: Liquid Purification Or Separation, Processes, Chromatography

Multicapillary device for sample preparation description/claims


The Patent Description & Claims data below is from USPTO Patent Application 20070017870, Multicapillary device for sample preparation.

Brief Patent Description - Full Patent Description - Patent Application Claims
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REFERENCE TO RELATED APPLICATIONS

[0001] This application claims benefit of U.S. patent application No. 10/955,377 filed Sep. 30, 2004, and U.S. Provisional Patent Application No. 60/507,474 filed Sep. 30, 2003.

BACKGROUND OF THE INVENTION

[0002] 1. Field of the Invention

[0003] The present invention relates to a multicapillary sample preparation device especially useful for handling biological samples. In particular, the multicapillary device is suitable for use with a pipette, micropipette, syringe, or other similar analytical instrument.

[0004] 2. Background Art

[0005] Many biological samples are commonly separated by gel electrophoresis and analyzed by matrix assisted laser desorption/ionization mass spectrometry (MALDI-MS). One disadvantage of these techniques, however, is that analysis is strongly affected by the presence of salts, buffers and low molecular weight organic compounds commonly used in the preparation of biological samples. In order to improve the sensitivity and selectivity of analyses, adsorptive and membranous devices are frequently used to purify and concentrate the sample prior to analysis. Such devices feature a bed of porous adsorbent or a semipermeable membrane fixed in a housing of a suitable dimension and shape that traps desired constituents, while allowing contaminants to pass.

[0006] To handle samples in the 0.01 to 100 microgram (.mu.g) range, pipettes, micropipettes, syringes or similar analytical instruments (collectively referred to hereinafter as "pipettes") are commonly employed. The tip of these pipettes is fitted with one or more adsorptive or membranous plugs capable of purifying, concentrating, or fractionating peptides and other biomolecules.

[0007] A principal shortcoming of adsorptive and membranous plugs, however, is that porous materials are generally not effective at separating smaller biomolecules such as proteins and polynucleotides. Porous plugs are also deficient with respect to isolating and purifying larger biological materials and nucleic acids such as DNA, RNA and cells. This shortcoming derives from the fact that during sample processing, molecules must wend through a labyrinth of sponge-like, expansive and porous adsorbent silica.

[0008] There is little uniformity, consistency, and reproducibility of porous materials used for sample preparation. Sample loss in existing pipette tips is typically about 40-60%. Poor sample recovery is largely due to the fact that a sample must travel through irregular voids in the porous material, whereby a portion of the sample lodges in small voids and is unrecoverable. Moreover, in order to achieve adequate results, samples must be passed through porous materials multiple times (e.g., ten). The sample preparation devices are usually not reusable and fit poorly with automatic instrumentation because poor sample recovery may give rise to contamination due to sample carry-over.

[0009] Spin columns and other apparatus operated by a centrifuge rotor are commonly used for the isolation and purification of biological and nucleic acid samples. However, it is desirable in certain applications to avoid the use of a centrifuge for rotating a specimen to be isolated and purified. This is due, in part, to the fact that horizontal separation may result in centrifugal forces of up to, for example, 4,000 RPM, being exerted on or transmitted along the vertical axis of the spin column and sample in order to achieve satisfactory separation. Air resistance negatively affects the spin column by generating drag and friction, which heat the spin column and its contents. Considerable breakage of sample fragments is unavoidable due to the heat transfer, acute centrifugal force and accompanying air resistance. The impaired quality of biological and nucleic acid samples extracted during spin column and centrifugal processing is highly undesirable to the user.

[0010] It can be seen, therefore, that the purification and concentration of biological and nucleic acid samples using porous materials prior to instrumental analysis is time consuming, is poorly reproducible, has low throughput, and requires repeated passing of a sample through the porous plug.

[0011] Accordingly, it is an object of the present invention to provide an efficient sample preparation device for use in isolating (immunoassay), purifying and concentrating samples of proteins, peptides, nucleic acids (e.g., DNA and RNA), and other biological materials (e.g., cells) prior to analysis.

[0012] It is also an object of the invention to provide a sample preparation device with high sample capacity that increases throughput and reduces sample loss.

[0013] It is a further object of the invention to provide a highly reproducible sample preparation device that achieves uniformity, consistency, and nearly identical pathways for sample passage.

[0014] It is a still further object of the invention to provide a sample preparation device that is simple, cost-effective, and does not require the use of a silica type porous substrate or special equipment such as a centrifuge.

SUMMARY OF THE INVENTION

[0015] The invention is a high surface area multicapillary sample preparation device especially useful for handling biological samples. The multicapillary device does not require use of a silica type porous substrate. Rather, the device incorporates a plurality of parallel capillary tubes, wherein the cavity of each tube remains open and unobstructed throughout sample processing. The capillary tubes of the device function independently of one another so that sample molecules are incapable of being physically exchanged or diffusing from one capillary to another. The multicapillary device is preferably disposed in a housing that is suitable for attachment to a "pipette" or other sample preparation or analytical instrument, enabling the isolation, purification, concentration and/or fractionation of nucleic acids or biological samples in the micro- and nanoliter range, as well as larger mass loads and volumes. In an embodiment of the invention, the multicapillary device features a monolithic element pierced with multiple uniform capillaries. The monolithic element is typically mounted in the lower end of a pipette tip, syringe needle or tubing, and is operated using a pipette.

[0016] For protein separation and purification applications, an insoluble stationary phase material is deposited onto the interior surfaces (walls) of each capillary tube, without employing a supporting or intermediary constituent.

[0017] The invention also includes a method of preparing a multicapillary device for protein sample preparation. In such method, inner walls of the capillary tubes are first coated with a stationary phase material, and then the monolithic element is mounted in an appropriate housing. Alternatively, the monolithic element can first be fixed in a housing, after which the capillary walls can be coated with the stationary phase. For operation, the multicapillary sample preparation device is attached to a pipette, micropipette, tube, syringe or similar analytical instrument.

BRIEF DESCRIPTION OF THE DRAWINGS

[0018] FIG. 1 is a perspective view of a multicapillary device for sample preparation in accordance with an embodiment of the present invention. Individual capillaries of the device are shown in the enlarged, cross-sectional views of FIGS. 2A, 2C and 2D (SEM). FIG. 2B is an exploded, perspective view of an individual capillary tube.

[0019] FIG. 3 depicts SEM images showing cross-sectional views of a conventional sample preparation device.

[0020] FIGS. 4A-4D are perspective views of pipette tips and a pipette format multicapillary device, respectively, in accordance with the present invention.

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