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Affymetrix, Inc Attn: ChiefIPCounsel, Legal Dept. patents

The following is a sampling of recent Affymetrix, Inc Attn: ChiefIPCounsel, Legal Dept. patent applications (USPTO Patent Application #, Patent Title) sorted by month.

June 2009 - Affymetrix, Inc Attn: ChiefIPCounsel, Legal Dept. patents

20090143249 - Bioarray chip reaction apparatus and its manufacture

May 2009 - Affymetrix, Inc Attn: ChiefIPCounsel, Legal Dept. patents

20090137419 - Sequencing of surface immobilized polymers utilizing microfluorescence detection
20090131268 - Methods for genotyping polymorphisms
20090117573 - Locus specific amplification using array probes

April 2009 - Affymetrix, Inc Attn: ChiefIPCounsel, Legal Dept. patents

20090098547 - Methods for identifying dna copy number changes using hidden markov model based estimations

March 2009 - Affymetrix, Inc Attn: ChiefIPCounsel, Legal Dept. patents

20090075345 - Methods for genotyping with selective adaptor ligation
20090076295 - Photocleavable protecting groups
20090062148 - Substrate preparation process
20090062149 - Photoacid generators for the synthesis of oligo-dna in a polymer matrix

February 2009 - Affymetrix, Inc Attn: ChiefIPCounsel, Legal Dept. patents

20090054258 - Nucleic acid labeling methods

January 2009 - Affymetrix, Inc Attn: ChiefIPCounsel, Legal Dept. patents

20090029865 - Identification of molecular sequence signatures and methods involving the same
20090010524 - Methods and apparatus for detection of fluorescently labeled materials
20090004701 - Multiplex oligonucleotide addition and target amplification

October 2008 - Affymetrix, Inc Attn: ChiefIPCounsel, Legal Dept. patents

20080261817 - Methods for analyzing global regulation of coding and non-coding rna transcripts involving low molecular weight rnas
20080254453 - Analysis of methylation using selective adaptor ligation

September 2008 - Affymetrix, Inc Attn: ChiefIPCounsel, Legal Dept. patents

20080232657 - Feature intensity reconstruction of biological probe array

August 2008 - Affymetrix, Inc Attn: ChiefIPCounsel, Legal Dept. patents

20080206779 - Methods and kits for multiplex hybridization assays
20080199916 - Multiplex targeted amplification using flap nuclease

June 2008 - Affymetrix, Inc Attn: ChiefIPCounsel, Legal Dept. patents

20080131894 - Enzymatic methods for genotyping on arrays

May 2008 - Affymetrix, Inc Attn: ChiefIPCounsel, Legal Dept. patents

20080108073 - Methods of analysis of methylation

April 2008 - Affymetrix, Inc Attn: ChiefIPCounsel, Legal Dept. patents

20080096771 - Methods, systems and computer software for designing and synthesizing sequence arrays

March 2008 - Affymetrix, Inc Attn: ChiefIPCounsel, Legal Dept. patents

20080070796 - Complexity management of genomic dna
20080057499 - Methods for high specificity whole genome amplification and hybridization

February 2008 - Affymetrix, Inc Attn: ChiefIPCounsel, Legal Dept. patents

20080044920 - Polymorphism detection
20080038713 - System and method for biological assay
20080038714 - Instrument to pneumatically control lab cards and method thereof
20080032408 - Tag nucleic acids and probe arrays

January 2008 - Affymetrix, Inc Attn: ChiefIPCounsel, Legal Dept. patents

20080020938 - System, method, and product for generating patterned illumination
20080014579 - Gene expression profiling in colon cancers
20080003667 - Consumable elements for use with fluid processing and detection systems
20080004848 - Direct to consumer genotype-based products and services

November 2007 - Affymetrix, Inc Attn: ChiefIPCounsel, Legal Dept. patents

20070275411 - Silane mixtures
20070267335 - System and method for bubble removal
20070267782 - System and method for making lab card by embossing
20070269817 - Methods for genotyping
20070269818 - Carbohydrate arrays
20070265366 - Photoacid generators for the synthesis of oligo-dna in a polymer matrix
20070255054 - Oligonucleotide synthesis with intermittent and post synthetic oxidation
20070255506 - System, method, and computer product for instrument control and management of consumable resources

October 2007 - Affymetrix, Inc Attn: ChiefIPCounsel, Legal Dept. patents

20070248975 - Methods for monitoring the expression of alternatively spliced genes
20070250809 - Computer software for visualizing genotyping data
20070243546 - Analysis of methylation using nucleic acid arrays
20070238185 - Oxide layers on silicon substrates for effective confocal laser microscopy
20070239380 - System, method, and computer product for detection instrument calibration

September 2007 - Affymetrix, Inc Attn: ChiefIPCounsel, Legal Dept. patents

20070218478 - Methods for fragmentation and analysis of nucleic acid
20070212710 - Competitive hybridization of dna probes and method of using the same

August 2007 - Affymetrix, Inc Attn: ChiefIPCounsel, Legal Dept. patents

20070197911 - System, method, and product for imaging probe arrays with small feature sizes
20070190566 - Quantified fluorescence microscopy
20070184454 - Methods and compositons for enhancing discrimination between perfect match and mismatch hybridization

July 2007 - Affymetrix, Inc Attn: ChiefIPCounsel, Legal Dept. patents

20070172852 - Non-destructive quality control methods for microarrays
20070161778 - Use of acid scavengers for the synthesis of standard lenght and long-mer nucleic acid arrays
20070154894 - Labeling and non-enzymatic fragmentation of cdna using a ribonucleoside triphosphate analog
20070154923 - Method for gridding and quality control of polymer arrays

June 2007 - Affymetrix, Inc Attn: ChiefIPCounsel, Legal Dept. patents

20070148667 - Methods and computer software for detecting splice variants
20070134692 - Method, system and, computer software for efficient update of probe array annotation data
20070128084 - Analytical biochemistry system with robotically carried bioarray
20070128647 - Methods for high throughput genotyping

May 2007 - Affymetrix, Inc Attn: ChiefIPCounsel, Legal Dept. patents

20070122838 - Methods and computer software products for identifying transcribed regions of a genome
20070099288 - Microfluidic methods, devices, and systems for fluid handling

April 2007 - Affymetrix, Inc Attn: ChiefIPCounsel, Legal Dept. patents

20070087368 - Method, system and computer software providing a genomic web portal for functional analysis of alternative splice variants

March 2007 - Affymetrix, Inc Attn: ChiefIPCounsel, Legal Dept. patents

20070048756 - Methods for whole genome association studies

January 2007 - Affymetrix, Inc Attn: ChiefIPCounsel, Legal Dept. patents

20070020639 - Isothermal locus specific amplification
20070020654 - Methods and kits for preparing nucleic acid samples
20070020668 - Method of manufacturing
20070016382 - Methods for selecting a collection of single nucleotide polymorphisms
20070009939 - Preparation of nucleic acid samples
20070003949 - Sequencing using tag array

December 2006 - Affymetrix, Inc Attn: ChiefIPCounsel, Legal Dept. patents

20060292585 - Analysis of methylation using nucleic acid arrays
20060292597 - Methods for genotyping with selective adaptor ligation
20060292626 - Methods of analysis of allelic imbalance
20060293860 - System, method, and computer product for correction of feature overlap
20060281126 - Methods for monitoring the expression of alternatively spliced genes
20060275805 - System, method, and computer product for exon array analysis

November 2006 - Affymetrix, Inc Attn: ChiefIPCounsel, Legal Dept. patents

20060271513 - Method and apparatus for providing an expression data mining database
20060257560 - Polymer surfaces for insitu synthesis of polymer arrays
20060259251 - Computer software products for associating gene expression with genetic variations
20060253035 - Methods and devices for reading microarrays
20060246490 - Miniaturized genetic analysis systems and methods

October 2006 - Affymetrix, Inc Attn: ChiefIPCounsel, Legal Dept. patents

20060240344 - Method of manufacture of polymer arrays
20060241868 - System, method, and computer product for simplified instrument control and file management
20060234264 - Multiplex polynucleotide synthesis
20060234270 - Normalization methods for gene expression analysis
20060229823 - Methods and computer software products for analyzing genotyping data
20060229824 - Arrays of nucleic acid probes for analyzing biotransformation genes
20060223097 - Capturing sequences adjacent to type-iis restriction sites for genomic library mapping

September 2006 - Affymetrix, Inc Attn: ChiefIPCounsel, Legal Dept. patents

20060216724 - Methods for normalized amplification of nucleic acids
20060216831 - Methods for automated collection of small volume of liquid
20060217913 - System, method, and computer software product for gain adjustment in biological microarray scanner
20060204991 - Nucleic acid affinity columns
20060200321 - Methods, systems and software for gene expression data analysis



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